Difference between revisions of "Simulations of Particle Interactions with Matter"

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:squeue
 
:squeue
 +
 +
to kill a batch job
 +
 +
:scancle JOBID
  
 
===On minerve===
 
===On minerve===

Revision as of 17:45, 28 October 2016

Class Admin

TF_SPIM_ClassAdmin

Homework Problems

HomeWork_Simulations_of_Particle_Interactions_with_Matter

Introduction

TF_SPIM_Intro

Energy Loss

TF_SPIM_StoppingPower

Ann. Phys. vol. 5, 325, (1930)

Interactions of Electrons and Photons with Matter

TF_SPIM_e-gamma

Hadronic Interactions

TF_SPIM_HadronicInteractions

Resources

GEANT4 Home Page

ROOT Home page

Fermi Lab Example


NIST Range Tables

X-ray specturm

Installing_GEANT4.9.3_Fsim

Saving/restoring Random number see

You save the current state of the random number generator with the command

/random/setSavingFlag 1

/random/saveThisRun

A file is created called

currentEvent.rndm

/control/shell mv currentEvent.rndm currentEvent10.rndm


You can restore the random number generator and begin generating random number from the last save time

/random/resetEngineFrom currentEvent.rndm

Building GEANT4.10

4.10.02

TF_GEANT4.10.2

4.10.01

TF_GEANT4.10.1

Building GEANT4.9.5

TF_GEANT4.9.5

An old version of Installation notes for versions prior to 9.5

Old Install Notes


Visualization Libraries:

OpenGL

DAWN


Coin3D

Compiling G4 with ROOT

These instruction describe how you can create a tree within ExN02SteppingVerbose to store tracking info in an array (max number of steps in a track is set to 100 for the desired particle)

G4CompileWRootforTracks

Using SLURM

http://slurm.schedmd.com/quickstart.html


https://rc.fas.harvard.edu/resources/documentation/convenient-slurm-commands/

simple batch script for one process job

create the file submit.sbatch below

#!/bin/sh
#SBATCH --time=1
cd src/PI
./PI_MC 100000000000000

the execute

sbatch submit.sbatch

check if its running with

squeue

to kill a batch job

scancle JOBID

On minerve

Sample script to submit 10 batch jobs.

the filename is minervesubmit and you run like

source minervesubmit
cd /home/foretony/src/GEANT4/geant4.9.5/Simulations/N02wROOT/batch
qsub submit10mil
qsub submit20mil
qsub submit30mil
qsub submit40mil
qsub submit50mil
qsub submit60mil
qsub submit70mil
qsub submit80mil
qsub submit90mil
qsub submit100mil

The file submit10mil looks like this

#!/bin/sh
#PBS -l nodes=1
#PBS -A FIAC
#PBS -M foretony@isu.edu
#PBS -m abe
#
source /home/foretony/src/GEANT4/geant4.9.5/geant4.9.6-install/bin/geant4.sh
cd /home/foretony/src/GEANT4/geant4.9.5/Simulations/N02wROOT/batch/10mil
../../exampleN02 run1.mac > /dev/null 


use

qstat

to check that the process is still running

use

qdel jobID#

if you want to kill the batch job, the jobID number shows up when you do stat.

for example

[foretony@minerve HW10]$ qstat
Job id                    Name             User            Time Use S Queue
------------------------- ---------------- --------------- -------- - -----
27033.minerve             submit           foretony        00:41:55 R default        
[foretony@minerve HW10]$ qdel 27033
[foretony@minerve HW10]$ qstat

Definitions of Materials

File:MCNP Compendium of Material Composition.pdf

Minerve2 GEANT 4.10.1 Xterm error

On OS X El Capitan V 10.11.4 using XQuartz

~/src/GEANT4/geant4.10.1/Simulations/B2/B2a/exsmpleB2a


# Use this open statement to create an OpenGL view:
/vis/open OGL 600x600-0+0
/vis/sceneHandler/create OGL
/vis/viewer/create ! ! 600x600-0+0
libGL error: failed to load driver: swrast
X Error of failed request:  BadValue (integer parameter out of range for operation)
  Major opcode of failed request:  150 (GLX)
  Minor opcode of failed request:  3 (X_GLXCreateContext)
  Value in failed request:  0x0
  Serial number of failed request:  25
  Current serial number in output stream:  26



TF_SPIM_OLD