View source for DiV: MaxEnt, Informatics, Unfolding, QM, etc...

[https://wiki.iac.isu.edu/index.php/RS go back]


==Dose Depth==
===Electron Spectrum Reconstruction===
*Chvetsov AV, Sandison GA '''Reconstruction of electron spectra using singular component decomposition''' Med. Phys. 29, 578 (2002)
*Chvetsov AV, Sandison GA '''Angular correction in reconstruction of electron spectra from depth dose distributions.''' Med Phys. 2003 Aug;30(8):2155-8.
*Wei J, Sandison GA, Chvetsov AV '''Reconstruction of electron spectra from depth doses with adaptive regularization.''' Med Phys. 2006 Feb;33(2):354-9.
*Faddegon BA, Blevis I. '''Electron spectra derived from depth dose distributions''' Med Phys. 2000 Mar;27(3):514-26.
*Technical Memorandum '''High energy electron beam energy determination through depth dose distribution''' June 26, 2002


===electron interaction with matter, educational===
*T. Tabata and R. Ito, '''The Passage of fast electrons through matter: The work at the Radiation Center of Osaka Prefecture and related topics'''
*R. K. Batra, M. L. Sehgal '''Range of electrons and positrons in matter''' Phys. Rev. B 23, 4448–4454 (1981)

==Dosimetric Film==
*Dusseau... '''High energy electron dose-mapping using optically stimulated luminescent films''' Nuclear Science, Dec. 1999
*Ezhov VV ... '''Using of dosimetric film for analysis of energy density distribution of a high-current pulsed electron beam''' Science and Technology (2005)


==Spectrum Reconstruction, general==
*E.T. Jaynes '''Predictive Statistical Mechanics'''
*R. Fischer... '''Enhancement of the energy resolution in ion-beam experiments with the maximum-entropy method''' Phys. Rev. E 55, 6667–6673 (1997)
*R. Fischer ... '''Energy resolution enhancement in ion beam experiments with Bayesian probability theory''' Nucl.Inst.Meth.Phys. Section B, 136p. 1140-1145.
*R Fischer, W. Von Der Linden, V. Dose '''Adaptive Kernels And Occam's Razor In Inversion Problems''' Proceeding of the MaxEnt Conference 1996 South Africa
*Robert L. Wolpert; Katja Ickstadt '''Reflecting uncertainty in inverse problems: A Bayesian solution using Lévy processes''' Inverse Problems 2004;20(6):1759-1771
*ROBERT L. WOLPERT, KATJA ICKSTADT, MARTIN B. HANSEN '''A Nonparametric Bayesian Approach to Inverse Problems''' BAYESIAN STATISTICS 7 (2003)
*L.J. Meng and D. Ramsden '''An Inter-comparison of Three Spectral-Deconvolution Algorithms for Gamma-ray Spectroscopy''' IEEE TRANSACTIONS, 47 (2000)
*Krmar M... '''A simple method for bremsstrahlung spectra reconstruction from transmission measurements.''' Med Phys. 2002 Jun;29(6):932-8.
*E. Breschi, ... '''A new algorithm for spectral and spatial reconstruction of proton beams from dosimetric measurements''' Nucl. Instr. and Meth. Phys. Res. A, 2004, Pages 190–195

==Bayesian==
*E. T. Jaynes '''Information Theory and Statistical Mechanics''' Phys. Rev. 106, 620–630 (1957)
*Edwin T. Jaynes '''Prior Probabilities''' IEEE Transactions On Systems Science and Cybernetics, vol. sec-4, no. 3, 1968, pp. 227-241
*H. M. Franca,  A. Maia,  Jr.,  and  C. P. Malta '''Maxwell  Electromagnetic  Theory, Planck's  Radiation  Law,  and Bose-Einstein  Statistics''' Foundations...  26, 1996 
*J. Aitchison '''On Coherence in Parametric Density Estimation'''  Vol. 77, No. 4, Dec., 1990   >   On Coherence in Para...
*S. Kullback; R. A. Leibler. '''On Information and Sufficiency'''  The Annals of Mathematical Statistics, Vol. 22, No. 1 (Mar., 1951), 79-86.
*J. Tersoff and David Bayer '''Quantum Statistics for Distinguishable Particles''' Phys. Rev. Lett. 50, 2038–2038 (1983)
*Shore, J., Johnson, R. '''Properties of cross-entropy minimization''' IEEE  TRANSACTIONS  ON  INFORMATION  THEORY,  VOL.  IT-27,  NO, 4, JULY
*M. Grendar, Jr., M. Grendar '''Maximum Probability and Maximum Entropy methods: Bayesian interpretation''' arXiv:physics/0308005v2  [physics.data-an]  9 Sep 2005
*R E Nettleton '''Fisher information as thermodynamic entropy model in a classical fluid''' 2003 J. Phys. A: Math. Gen. 36 2443
*Harremoes, P. '''Binomial and Poisson distributions as maximum entropy distributions''' IEEE TRANSACTIONS ON INFORMATION THEORY, VOL. 47, NO. 5, JULY 2001
*Robert K. Niven '''Combinatorial Information Theory: I. Philosophical Basis of Cross-Entropy and Entropy''' arXiv:cond-mat/0512017v5  [cond-mat.stat-mech]  20 Apr 2007
*Ariel Caticha, Roland Preuss '''Maximum entropy and Bayesian data analysis: Entropic prior distributions'''  Physical Review E - PHYS REV E , vol. 70, no. 4, 2004
*W. Von der Linden , R. Preuss , V. Dose '''The Prior-Predictive Value: A Paradigm of Nasty Multi-Dimensional Integrals''' (1999)

==Informatics==
*Alfredo Luis, Alfonso Rodil '''Alternative measures of metrological resolution: contradictions and possible lack of limits''' 2012
*Robert E. Kass '''The Geometry of Asymptotic Inference'''  Statist. Sci. Volume 4, Number 3 (1989), 188-219.
*Harold Jeffreys '''An Invariant Form for the Prior Probability in Estimation Problems''' 
*Bernardo '''Reference posterior distribution for bayesian inference'''
*Sýkora, Stanislav, '''Quantum theory and the bayesian inference problems''', Journal of Statistical Physics, Volume 11, Issue 1, 1974
*M. Raviculé, M. Casas, and A. Plastino '''Information and metrics in Hilbert space''' Phys. Rev. A 55, 1695–1702 (1997)
*P. W. Lamberti, A. P. Majtey, A. Borras, M. Casas, and A. Plastino '''Metric character of the quantum Jensen-Shannon divergence''' Phys. Rev. A 77, 052311 (2008)
*Samuel L. Braunstein and Carlton M. Caves '''Statistical distance and the geometry of quantum states''' Phys. Rev. Lett. 72, 3439–3443 (1994)
*W. K. Wootters  '''Statistical distance and Hilbert space''' Phys. Rev. D 23, 357–362 (1981)
*James O. Berger, Jose M. Bernardo and Dongchu Sun '''THE FORMAL DEFINITION OF REFERENCE PRIORS''' The Annals of Statistics 2009, Vol. 37, No. 2, 905–938
*W. T. Grandy, Jr. '''Resource Letter ITP-1: Information Theory in Physics''' Am. J. Phys. June 1997 Volume 65

==Drinking Bird Toy?==
*E. T. Jaynes '''Note on thermal heating efﬁciency''' Am. J. Phys. 71 ~2!, February 2003
*Richard R. Annis  '''Radioactive Battery 111604 Part one''' 6th August 1952
*Ralph Lorenz '''Finite-time thermodynamics of an instrumented drinking bird toy''' Am. J. Phys. 74 (8), August 2006
*E. T. Jaynes '''The Second Law as Physical Fact and as Human Inference'''


==Probability Distance?==
*Anand G. Dabak , Don H. Johnson '''Relations between Kullback-Leibler distance and Fisher information''' (2002)
*Jianhua Lin, '''Divergence Measures Based on the Shannon Entropy''' IEEE TRANSACTIONS ON INFORMATION THEORY.  VOL. 37,  NO. I ,   JANUARY  1991
*S.M. Ali and D. Silvey. '''A general class of coefﬁcients of divergence of one distribution from another.''' J. Roy. Stat. Soc., Ser. B, 28: 131–142, 1966.


==unnamed folder==
*Tommaso Toffoli, '''How much of physics is just computation?''', Superlattices and Microstructures, 23, 381-406 (1998)
*Norman Margolus, Lev B. Levitin '''The maximum speed of dynamical evolution''' Physica D 120 (1998) 188-195


==MaxEnt Unfolding==
*E.T. jaynes '''Prior information and ambiguity in inverse problem''' SIAM-AMS Proceeding V14 1984
*S.F. Gull and J. Skilling, '''Maximum Entropy Image Reconstruction: General Algorithm''', Monthly Notices of the Royal Astronomical Society, Vol. 211, NO.1, P. 111, 1984
*S.F. Gull and J. Skilling, '''Maximum entropy method in image processing'''', IEE PROCEEDINGS, Vol. 131, Pt. F, No. 6, OCTOBER 1984
*J. M. Borwein, A. S. Lewis and D. Noll '''Maximum Entropy Reconstruction Using Derivative Information, Part 1: Fisher Information and Convex Duality'''
*J. M. Borwein , A. S. Lewis , M. N. Limber , D. Noll '''Maximum Entropy Spectral Analysis Using Derivative Information Part 2: Computational Results'''
*K. Zarb Adami '''Variational Methods in Bayesian Deconvolution''' PHYSTAT2003,  SLAC, Stanford, California, September 8-11, 2003
*M. Reginatto ... '''An unfolding method for directional spectrometers''' Radiat Prot Dosimetry. 2004;110(1-4):539-43.
*M. Reginatto ... '''Spectrum unfolding, sensitivity analysis and propagation of uncertainties with the maximum entropy deconvolution code MAXED ''' Nucl.Inst.Meth.Phys. Section A, 476 (2002)
*Shore, J., Johnson, R. '''Properties of cross-entropy minimization''' IEEE  TRANSACTIONS  ON  INFORMATION  THEORY,  VOL.  IT-27,  NO, 4, JULY
*G. D'Agostini '''Improved iterative Bayesian unfolding''' arXiv:1010.0632v1  [physics.data-an]  4 Oct 2010
*A. Mohammad-Djafari, Jérôme Idier '''A scale invariant Bayesian method to solve linear inverse problems''' arXiv:physics/0111125v1  [physics.data-an]  14 Nov 2001
*Shikoh ITOH & Toshiharu TSUNODA '''Neutron Spectra Unfolding with Maximum Entropy and Maximum Likelihood''' J. Nucl. Sci. Tech. Volume 26, Issue 9, 1989
*Yuan Qi, Thomas P. Minka, and Rosalind W. Picard '''Bayesian Spectrum Estimation of Unevenly Sampled Nonstationary Data''' EDICS: 2-TIFR, 2-SPEC
*Aristidis C. Likas ... '''A Variational Approach for Bayesian Blind Image Deconvolution''' IEEE TRANSACTIONS  2004
*U. Gerhardt ... '''Bayesian deconvolution and analysis of photoelectron or any other spectra: Fermi-liquid versus marginal Fermi-liquid behavior of the 3d electrons in Ni''' Phys. Rev. B Volume 58 Issue 11
*Jose M. Bioucas-Dias, Mario A. T. Figueiredo, and Joao P. Oliveira '''ADAPTIVE TOTAL VARIATION IMAGE DECONVOLUTION: A MAJORIZATION-MINIMIZATION APPROACH''' 
*Satoh, T., Matsui, A.,  Hirohata, T.,  Matsumoto, T. '''A hierarchical Bayesian deconvolution with positivity constraints''' 0-7803-5871-6/99/$10.00 1999 IEEE
*F. Gamboa and E. Gassiat '''Bayesian methods and maximum entropy for ill-posed inverse problems''' Annals Statis. 25 (1997)
*S. Gadomski ... '''The deconvolution method of fast pulse shaping at hadron colliers''' Nuc.Ins.Meth.Phys. Research A, 320 (1992)
*Los Arcos, Josém '''Gamma-ray spectra deconvolution by maximum-entropy methods''' Nuc. Ins. Meth. Phys. Research A, 369 (19996)
*FRÖHNER F. H. '''Assigning uncertainties to scientific data'''
*Georgios Choudalakis '''Fully Bayesian Unfolding'''
*Manfred Matzke '''Unfolding Methods'''

==MaxEnt, Bayesian, Probability, I==
*Cox, R. T. '''Probability, Frequency and Reasonable Expectation''' American Journal of Physics, Volume 14, Issue 1, pp. 1-13 (1946)
*Alfréd Rényi, '''On Measures of Entropy and Information''' Proc. Fourth Berkeley Symp. on Math. Statist. and Prob., Vol. 1 (Univ. of Calif. Press, 1961), 547-561.
*CLAUDE E. SHANNON, '''Communication in the Presence of Noise''', PROCEEDINGS OF THE IEEE, VOL. 86, NO. 2, FEBRUARY 1998 447

*Jaynes, E. T., '''The Minimum Entropy Production Principle''', Ann. Rev. Phys. Chem. 31, 579, 1980
*Jaynes, E. T., '''Macroscopic Prediction''', in Complex Systems - Operational Approaches, H. Haken (ed.), Springer-Verlag, Berlin, p. 254, 1985
*Jaynes, E. T., '''Probability in Quantum Theory''', in Complexity, Entropy, and the Physics of Information, W. H. Zurek (ed.), Addison-Wesley, Redwood City, CA, p. 381, 1990
*Ariel Caticha, '''From Inference to Physics''', Presented at MaxEnt 2008, the 28th International Workshop on Bayesian Inference and Maximum Entropy Methods in Science and Engineering (July 8-13, 2008, Boraceia Beach, Sao Paulo, Brazil)
*Ariel Caticha, '''Entropic Dynamics''', Presented at MaxEnt 2001, the 21th International Workshop on Bayesian Inference and Maximum Entropy Methods (August 4-9, 2001, Baltimore, MD, USA)
*Ariel Caticha, '''Updating Probabilities''', Presented at MaxEnt 2006, the 26th International Workshop on Bayesian Inference and Maximum Entropy Methods (July 8-13, 2006, Paris, France)
*Ariel Caticha, '''Relative Entropy and Inductive Inference''', Presented at MaxEnt 2003, the 23rd International Workshop on Bayesian Inference and Maximum Entropy Methods (August 3-8, 2003, Jackson Hole, WY, USA)
*John Skilling '''Probability and Geometry''' AIP Conf. Proc. 954, pp. 39-46
*Skilling, John, '''The Canvas of Rationality''', BAYESIAN INFERENCE AND MAXIMUM ENTROPY METHODS IN SCIENCE AND ENGINEERING: Proceedings of the 28th International Workshop on Bayesian Inference and Maximum Entropy Methods in Science and Engineering. AIP Conference Proceedings, Volume 1073, pp. 67-79 (2008).
*Sýkora, Stanislav, '''Quantum theory and the bayesian inference problems''', Journal of Statistical Physics, Volume 11, Issue 1, 1974

*Shore, J., Johnson, R. '''Axiomatic Derivation of the Principle of Maximum Entropy and the Principle of Minimum Cross-Entropy''' 
IEEE TRANSACTlIONS ON lNFORMATION THEORY, VOL. m26, NO. 1, JANUARY 1980
*Shore, J., Johnson, R. '''Properties of cross-entropy minimization''' IEEE  TRANSACTIONS  ON  INFORMATION  THEORY,  VOL.  IT-27,  NO, 4, JULY
*Kevin H. Knuth, John Skilling, '''Foundations of Inference''', Axioms 2012, 1(1):38-73
*Kevin H. Knuth, '''The Origin of Probability and Entropy''', Bayesian inference and Maximum Entropy Methods in Science and Engineering, Sao Paulo, Brazil, 2008
*Y. Tikochinsky, '''Feynman Rules for Probability Amplitudes''', International Journal of Theoretical Physics, Vol. 27, No. 5, 1988
*Y. Tikochinsky*, N. Z. Tishby*, and R. D. Levine ,'''Consistent Inference of Probabilities for Reproducible Experiments''', Phys. Rev. Lett. 52, 1357–J. M. Borwein, A. S. Lewis and D. Noll1360 (1984)
*P. Ván '''Unique additive information measures - Boltzmann-Gibbs-Shannon, Fisher and beyond''' Physica A, 2006, V365, p28-33

*Jos Uffink, '''The Constraint Rule of the Maximum Entropy Principle''', Studies of the History and Philosophy of Modern Physics, 27, 47-49, 1996
*Jos Uffink, '''Can the Maximum Entropy Principle Be Explained as a Consistency Requirement?''', Stud.Hist.Phil.Mod.Phys. 26, 223-261, 1995
*Tommaso Toffoli, '''How much of physics is just computation?''', Superlattices and Microstructures, 23, 381-406 (1998)
*Tommaso Toffoli, '''Action, Or the Fungibility of Computation''', Feynman and Computation, 349-392 (1999)
*Tommaso Toffoli, '''Occam, Turing, von Neumann, Jaynes: How much can you get for how little?''', proceedings of the conference ACRI '94: Automi Cellulari per la Ricerca e l'Industria, Rende (CS), Italy, September 29--30, 1994

*Plastino, A.; Plastino, A. R., '''On the universality of thermodynamics' Legendre transform structure''', Physics Letters A 226 (1997) 257-263
*A. Plastino, E. M. F. Curado, '''Equivalence between maximum entropy principle and enforcing dU=TdS''', Phys. Rev. E 72, 047103 (2005)
*A. Plastino, A. R. Plastino, B H Soffer, '''Fisher information and thermodynamics' 1st. law''', arXiv:cond- mat/0509697 v2 28 Sep 2005
*F. Pennini, A. Plastino, '''Heisenberg-Fisher thermal uncertainty measure''', Phys. Rev. E 69, 057101 (2004)
*F. Pennini and A. Plastino, '''Reciprocity relations between ordinary temperature and the Frieden-Soffer Fisher temperature''', Phys. Rev. E 71, 047102 (2005)
*A. Hernando, A. Plastino, A. R. Plastino, '''MaxEnt and dynamical information''', arXiv:1201.0889v1 [physics.data-an] 4 Jan 2012

*Michael E. Fisher '''Solution of a Combinatorial Problem—Intermediate Statistics''' American Journal of Physics -- January 1962 -- Volume 30, Issue 1, pp. 49
*B. Roy Frieden and Bernard H. Soffer '''Lagrangians of physics and the game of Fisher-information transfer''' Phys. Rev. E 52, 6917–6917 (1995)
*Humphrey J. Maris and Leo P. Kadanoff '''Teaching the renormalization group''' American Journal of Physics -- June 1978 -- Volume 46, Issue 6, pp. 652
*W. K. Wootters  '''Statistical distance and Hilbert space''' Phys. Rev. D 23, 357–362 (1981)
*Kurt Wiesenfeld '''Resource Letter: ScL-1: Scaling laws''' American Journal of Physics -- September 2001 -- Volume 69, Issue 9, pp. 938
*V Dose '''Bayesian inference in physics: case studies''' 2003 Rep. Prog. Phys. 66 1421
*Anand G. Dabak , Don H. Johnson '''Relations between Kullback-Leibler distance and Fisher information''' (2002)

==MaxEnt, Bayesian, Probability, II==
*Sattin, F. '''Bayesian approach to superstatistics''' European Physical Journal B -- Condensed Matter;Jan2006, Vol. 49 Issue 2, p219
*Oliver Johnson '''A conditional Entropy Power Inequality for dependent variables''' IEEE Transactions on Information Theory, Vol 50/8, 2004, p. 1581-1583
*M. Grendar, Jr., M. Grendar '''Maximum Probability and Maximum Entropy methods: Bayesian interpretation''' AIP (Melville), 490-494, 2004
*Ekrem Aydiner, Cenk Orta, Ramazan Sever '''Quantum information entropies of the eigenstates of the Morse potential''' Int. J. Mod. Phys. B Vol 22 (2008) 231
*Robert K. Niven '''Exact Maxwell-Boltzmann, Bose-Einstein and Fermi-Dirac Statistics''' Physics Letters A, 13/5/05
*A. M. C. Souza, C. Tsallis '''Stability of the entropy for superstatistics''' Physics Letters A 319, 273 (2003)
*S N Karbelkar '''On the axiomatic approach to the maximum entropy principle of inference''' Pramana April 1986, Volume 26, Issue 4, pp 301-310
*Garrett, Anthony J. M. '''Maximum entropy from the laws of probability''' AIP Conference Proceedings; 2001, Vol. 568 Issue 1, p3
*A. G. Bashkirov '''Renyi entropy as a statistical entropy for complex systems''' Theoretical and Mathematical Physics, November 2006, Volume 149, Issue 2, pp 1559-1573
*Marco Masi '''Generalized information-entropy measures and Fisher information''' 
*Manfred Jaeger '''Measure selection: Notions of rationality and representation independence''' (1998) Proceedings of the 14th conference on Uncertainty in Artificial Intelligence
*L Velazquez '''Fluctuation geometry: A counterpart approach of inference geometry''' 
*Peter Beerli '''Comparison of Bayesian and maximum-likelihood inference of population genetic parameters''' 
* W. Von , W. von der Linden , R. Preuss , V. Dose '''The Prior-Predictive Value: A Paradigm of Nasty Multi-Dimensional Integrals''' (1999)
*Magni, P., Bellazzi, R. ;  De Nicolao, G., '''Bayesian function learning using MCMC methods'''
*John Archibald Wheeler '''‘‘On recognizing ‘law without law,’ ’’ Oersted Medal Response at the joint APS–AAPT Meeting, New York, 25 January 1983'''
*Brillouin, L.  '''The Negentropy Principle of Information'''
*L. Brillouin '''Maxwell's Demon Cannot Operate: Information and Entropy. I''' J. Appl. Phys. 22, 334 (1951)
*Marcel Reginatto  '''Derivation of the equations of nonrelativistic quantum mechanics using the principle of minimum Fisher information''' Phys. Rev. A 58, 1775–1778 (1998)
*Takuya Yamano '''On the robust thermodynamical structures against arbitrary entropy form and energy mean value''' 
*Lucy, L. B. '''An iterative technique for the rectification of observed distributions''' Astronomical Journal, Vol. 79, p. 745 (1974)
*Mendes, R. S. '''Some general relations in arbitrary thermostatistics''' Physica A, Volume 242, Issue 1-2, p. 299-308.
*R E Nettleton '''Fisher and Jaynesian statistics compared in the description of classical fluids''' Journal of Physics A: Mathematical and General Volume 35 Number 2
*Piotr Garbaczewski '''Entropy methods in random motion''' Acta Phys. Pol. B 37, 1503-1520, (2006)
*Samuel L. Braunstein and Carlton M. Caves  '''Statistical distance and the geometry of quantum states''' Phys. Rev. Lett. 72, 3439–3443 (1994)
*Pöschel T, Ebeling W, Frömmel C, Ramírez R. '''Correction algorithm for finite sample statistics.''' Eur Phys J E Soft Matter. 2003 Dec;12(4):531-41.
*Don H. Johnson and Sinan Sinanovi´c '''Symmetrizing the Kullback-Leibler distance'''
*Sinan Sinanović , Don H. Johnson '''Toward a theory of information processing''' Signal Processing Volume 87, Issue 6, June 2007, Pages 1326–1344
*S.M. Ali and D. Silvey. '''A general class of coefﬁcients of divergence of one distribution from another.''' J. Roy. Stat. Soc., Ser. B, 28: 131–142, 1966.
*By H. Haken '''Application of the Maximum Entropy Principle to Nonlinear Systems Far from Equilibrium '''
*S. Ciulli1, M. Mounsif, N. Gorman, and T. D. Spearman '''On the application of maximum entropy to the moments problem''' J. Math. Phys. 32, 1717 (1991)

==MaxEnt, Bayesian, Probability, III==
*Dr V. Dimitrov some notes 14 pages
*R N Silver '''Quantum Statistical Inference''' Workshop on Physics and Computation (1992) Volume: 65, Issue: 4
*Alexis Akira Toda '''Unification of Maximum Entropy and Bayesian Inference via Plausible Reasoning''' IEEE Transactions on Information Theory on March 8, 2011
*John C. Baez, Tobias Fritz, Tom Leinster '''A Characterization of Entropy in Terms of Information Loss''' Entropy 2011, 13(11), 1945-1957
*Petr Jizba, Toshihico Arimitsu '''The world according to Renyi: Thermodynamics of multifractal systems''' Annals Phys. 312 (2004) 17-57
*Imre Csiszár '''Axiomatic Characterizations of Information Measures''' Entropy 2008, 10, 261-273
*B.Lesche '''Renyi entropies and observables'''
*Abe S. '''Stability of Tsallis entropy and instabilities of Rényi and normalized Tsallis entropies: a basis for q-exponential distributions.''' Phys Rev E 2002 Oct; 66
*Jizba P, Arimitsu T. '''Observability of Rényi's entropy.''' Phys Rev E Stat Nonlin Soft Matter Phys. 2004 Feb; 69
*Paul Snow. '''Inference using conditional probabilities despite prior ignorance.''' IEEE Transactions on Systems, Man, and Cybernetics, Part A 26(3):349-360 (1996)
*Trevor W. Marshall '''Nonlocality - The party may be over'''
*Trevor Marshall, Emilio Santos '''Stochastic optics: A reaffirmation of the wave nature of light''' Foundations of Physics February 1988, Volume 18, Issue 2, pp 185-223
*'''Choice of Priors for Low-dimensional Parameters'''
*Piero G. Luca Mana '''Consistency of the Shannon entropy in quantum experiments''' Phys. Rev. A 69, 062108 (2004)
*R E Nettleton '''Fisher and Jaynesian statistics compared in the description of classical fluids''' 2002 J. Phys. A: Math. Gen. 35 295
*G D'Agostini '''Bayesian inference in processing experimental data: principles and basic applications''' 2003 Rep. Prog. Phys. 66 1383
*Arthur Baraov '''The exchange paradox: a misapplication of the principle of indifference'''
*B. Roy Frieden, B. H. Soffer '''A CRITICAL COMPARISON OF THREE INFORMATION-BASED APPROACHES TO PHYSICS''' Found. Phys. Let. 2000, Volume 13
*Luc Demortier, Supriya Jain, Harrison B. Prosper '''Reference priors for high energy physics''' Phys.Rev.D82:034002,2010
*chapter 4 ''Uniqueness of fisher metric'' printout

==QM==
*R N Silver '''Quantum Statistical Inference''' Workshop on Physics and Computation (1992) Volume: 65, Issue: 4
*Igor Vajda '''On Convergence of Information Contained in Quantized Observations''' IEEE TRANSACTIONS ON INFORMATION THEORY, VOL. 48, NO. 8, AUGUST 2002

*David S. Weiss '''Precision measurement of the photon recoil of an atom using atomic interferometry''' Phys. Rev. Lett. 70, 2706–2709 (1993)
*Z. Haba, H. Kleinert, '''Schrödinger wave functions from classical trajectories''' Physics Letters A Volume 294, Issues 3–4, 25 February 2002, Pages 139–142
*Piotr Garbaczewski '''Relativistic problem of random flights and Nelson's stochastic mechanics''' Physics Letters A Volume 164, Issue 1, 6 April 1992, Pages 6–16
*John S. Bell '''On the Einstein Podolsky Rosen paradox'''
*A.F. KRACKLAUER, '''La “théorie” de Bell est-elle la plus grande méprise de l’histoire de la physique?''' Ann. Fond. Louis de Broglie, Vol. 25, n°2, 2000.
*L. Fortunato '''Solution of the Bohr hamiltonian for soft triaxial nuclei''' Phys.Rev. C74 (2006) 014310
*C. P. Malta '''Wigner density of a rigid rotator''' Phys. Rev. E 55, 2551–2556 (1997)
*A. Garrett Lisi '''Quantum mechanics from a universal action reservoir''' arXiv:physics/0605068v1  [physics.pop-ph]  8 May 2006
*B. Holdom '''Approaching quantum behavior with classical fields''' J.Phys.A39:7485,2006

*Arthur Davidson  '''Re-Thinking Schrodinger Boundary Conditions: The Simple Rotator is Not Simple'''
*R. Gurtler and D. Hestenes '''Consistency in the formulation of the Dirac, Pauli, and Schrödinger theories''' J. Math. Phys. 16, 573 (1975)
*M. Ibison, B. Haisch '''Quantum and classical statistics of the electromagnetic zero-point field''' Phys. Rev. A, vol. 54, pp. 2737-2744 (1996)
*Michael J. W. Hall '''Schrodinger equation from an exact uncertainty principle''' J. Phys. A 35 (2002) 
*Peter Ván and Tamás Fülöp '''Weakly non-local fluid mechanics: the Schrödinger equation''' Proc. R. Soc. A 2006 462
*J. V. Corbetta and C. A. Hurst '''Are wave functions uniquely determined by their position and momentum distributions?''' J. Aust. Math. Soc.  B, 20, 1977
*R. P. Feynman '''Space-Time Approach to Non-Relativistic Quantum Mechanics''' Rev. Mod. Phys. 20, 367–387 (1948)
*J. C. Aron '''Quantum Laws in Connection with Stochastic Processes''' Prog. Theor. Phys. Vol. 33 No. 4 (1965) pp. 726-754
*J. C. Aron '''A stochasic Basic for Microphysics''' Foundation of Physics, 9 (1979)
*C. Wetterich '''Quantum particles from coarse grained classical probabilities in phase space''' arXiv:1003.3351
*Iwo Bialynicki-Birula '''Hydrodynamic form of the Weyl equation''' Acta Physica Polonica B 26, 1201 (1995)
*Raskin, Paul D. '''Short-time stochastic electron''' Foundations of Physics, Volume 8, Issue 1-2, pp. 31-44

*''Solution of inhomogeneous wave equation'' printout 6 pages
*''Integral scattering equation for stationary states'' printout 4 pages
*''Wave-functions...'' printout 6 pages
*''Eigenfunctions'' printout 4 pages

==Random Walk, Relativistic Diffusion, Rotation==
*Guth, Eugene '''New Class of Classical Uncertainty Relations Giving Uncertainty for Long and Certainty for Short Times''' Phys. Rev. 126, 1213–1215 (1962)
*Joseph B. Keller '''Diffusion at finite speed and random walks''' PNAS Feb 3, 2004, vol. 101 no. 5
*EUGENE C. ... '''THE MATHEMATICS OF SUSPENSIONS: KAC WALKS AND ASYMPTOTIC ANALYTICITY''' Published July 10, 2000.
*Peter Kostädt '''Causality and stability of the relativistic diffusion equation''' Phys. Rev. D 62, 023003 (2000)
*Peter Kostädt '''On the Causality and Stability of the Relativistic Diffusion Equation''' Phys. Rev. D 62, 023003 (2000)
*Josep M. Porra ... '''When the telegrapher's equation furnishes a better approximation to the transport equation than the diffusion approximation''' Phys. Rev. E 55 (1997)
*J Almaguer  '''A relativistically covariant random walk''' J. Stat. Mech. (2007) P08019
*Jaume Masoliver  '''Finite-velocity diffusion''' 1996 Eur. J. Phys. 17 190
*E. Orsingher '''Random Flights in Higher Spaces''' J Theor Prob, December 2007, Volume 20, Issue 4, pp 769-806
*Stadje, Wolfgang '''Exact probability distributions for noncorrelated random walk models''' J Statist Physics, Volume 56, Issue 3-4, pp. 415-435
*V Balakrishnan  '''On the connection between biased dichotomous diffusion and the one-dimensional Dirac equation''' 2005 New J. Phys. 7 11
*Jen-Tsung Hsiang '''Brownian motion of a charged particle in electromagnetic fluctuations at finite temperature''' 
*Yuxing Ben  '''Lecture 24: Non-Markovian Diﬀusion Equations'''
*H. A. KRAMERS '''BROWNIAN  MOTION  IN  A  FIELD  OF  FORCE AND  THE  DIFFUSION  MODEL OF  CHEMICAL  REACTIONS''' Physica  VII, 4, April, 1940

*Don C. Kelly '''Diffusion: A Relativistic Appraisal''' American Journal of Physics -- July 1968 -- Volume 36, Issue 7, pp. 585
*Dudley, R. M. '''Lorentz-invariant Markov processes in relativistic phase space''' Arkiv fü Matematik, Volume 6, Issue 3, pp.241-268, 1966
*Jörn Dunkel*, Peter Talkner, and Peter Hänggi '''Relativistic diffusion processes and random walk models''' Phys. Rev. D 75, 043001 (2007)
*Jörn Dunkel, Peter Hänggi '''Relativistic Brownian Motion''' Phys. Rep. 471(1): 1-73, 2009
*Joachim Herrmann '''Diffusion in the special theory of relativity''' 	arXiv:0903.0751
*Z. Haba '''Relativistic diffusion''' Phys. Rev. E 79, 021128 (2009)
*Z. Haba '''Relativistic diffusive motion in random electromagnetic fields''' J.Phys. A44 (2011)
*Gregory Ryskin  '''Brownian Motion in a Rotating Fluid: Diffusivity is a Function of the Rotation Rate''' Phys. Rev. Lett. 61, 1442–1445 (1988)
*G. W. Ford '''Rotational Brownian motion of an asymmetric top''' Phys. Rev. A 19, 907–919 (1979)
*R. F. O'Connell '''Stochastic Methods in Atomic Systems and QED''' Can.J.Phys.87,1-5 (2009)
*R. T. Cox '''Brownian Motion in the Theory of Irreversible Processes''' Rev. Mod. Phys. 24, 312–320 (1952)

==EM(I) Fields, Radiation==
*E. T. Jaynes '''Survey of the Present Status of Neoclassical Radiation Theory''' Coherence and Quantum Optics, 1973, pp 35-81
*A. Valentini '''Resolution of Causality Violation in the Classical Radiation Reaction''' Phys. Rev. Lett. 61, 1903–1905 (1988)
*Yu.A. Rylov '''Pauli's Electron as a Dynamic System''' Foundations of Physics, July 1995, Volume 25, Issue 7, pp 1055-1086
*K.R. Greider '''A unifying Clifford algebra formalism for relativistic fields''' Foundations of Physics, June 1984, Volume 14, Issue 6, pp 467-506
*J. Avendaño '''Reordering of the ridge patterns of a stochastic electromagnetic field by diffraction due to an ideal slit''' Phys. Rev. E 72, 066605 (2005)
*Michael Ibison '''Are Advanced Potentials Anomalous?'''

==EM(II.1) Electron, Radiation==
*printout '''Nomenclature: The field from a point source ...'''
*handwritten '''CED tasks ...''' 14 pages
*T.H. Boyer '''Unfamiliar trajectories for a relativistic particle in a Kepler or Coulomb potential ''' 2004
*M. Marino '''The unexpected flight of the electron in a classical hydrogen-like atom''' J.Phys.A:Math.Gen. 36 2003
*M. Marino '''Classical electrodynamics of point charges''' Annals Phys. 301 (2002) 85-127
*A. Gsponer '''Distributions in spherical coordinates with applications to classical electrodynamics''' Eur. J. Phys. 28 2007
*A. Gsponer '''The locally-conserved current density of the Lienard-Wiechert field''' 2007
*A. Gsponer '''Derivation of the potential, field, and locally-conserved charge-current density of an arbitrary moving point-charge''' (2006)
*A. Gsponer '''Distribution in spherical coordinates with application to classical electrodynamics''' Eur.J.Phys 28 2007
*A. Carati '''Nonradiating normal modes in a classical many-body model of matter-radiation interaction''' 2005
*D. Hestenes '''Local observables in the Dirac theory''' J.Math.Phys. 14 1973
*D. Hestenes '''Observables, operators, and complex numbers in the Dirac theory''' J.Math.Phys. 16 1975
*F. Tangherlini '''Self-Stress, covariance and the classical electron''' Am.J.Phys. 31 1962
*F. Tangherlini '''General relativistic approach to the Poincare Compensating Stresses for the Classical Point Electron''' 1962
*H.P. Gittel '''The relativistic dynamics of the combined particle-field system in renormalized classical electrodynamics''' Commun.Math.Phys. 198 1998

==EM(II.2) Electron, Radiation==
*C.P. Frahm '''Some novel delta-function identities''' Am.J.Phys. 51 1983
*S.M. Blinder '''Delta function in spherical coordinates and how to avoid losing them: Fields of point charges and dipoles''' Am.J.Phys. 71 2003
*S.M. Blinder '''Classical electrodynamics with vacuum polarization: electron self-energy and radiation reaction''' 2001
*C. Teitelboim '''Splitting of the Maxwell Tensor: Radiation Reaction without Advanced Fields''' Phys.Rev.D 1(6) 1970
*D.V. Gal'tsov '''Radiation reaction reexamined: bound momentum and Schott term''' 2004
*J. Kijowskij '''Born renormalization in classical Maxwell electrodynamics''' 2003
*printout '''Appendix A: Asymptotic expansion of the field near a point charge'''
*P.A.M. Dirac '''A new classical theory of electrons''' Proc.Royal Soc. London 1951
*N.P. Klepikov '''Radiation damping forces and radiation from charged particles''' Usp.Fiz.Nauk 146 1985
*J.M. Nester '''An accelerated charge is also absorbing power''' 1998
*J.A.E. Roa-Neri '''An Alternative Approach to the classical Dynamics of Extended Charged Particle''' Found.Phys. 32(10) 2002
*P. Havas '''On the classical equation of Motion of Point Charges''' Phys.Rev. 74(4) 1948
*F.V. Hartemann '''Classical electrodynamical derivation of the radiation damping force''' Phys.Rev.Let. 74(7) 1995
*E. Poisson '''An introduction to the Lorentz-Dirac equation''' 1999
*J.A. Wheeler '''Interaction with the absorber as the mechanism of radiation''' Rev.Mod.Phys. 17(2,3) 1945
*J.L. Agudin '''Bradyons and tachyons in an expansion of the spherical wave ... into cylindrical waves''' J.Math.Phys 25(4) 1984
*J.L. Agudin '''Tachyons and the radiation of an accelerated charge''' Phys.Rev.D 26(8) 1982
*J.L. Agudin '''On Sommerfeld's 'Tachyonic" solutions''' 1981
*C.J.L. Lagrange '''Particle and Field Dynamics''' (2001)
*B.Bounaura '''Maxwell equations and inertial transformation''' Found.Phys.Lett. 17(7) 2004
*J.F. Colombeau '''Nonlinear generalizrd functions and the Heisenberg-Puili foundations of quantum field theory''' 2007
*handwritten '''Wave equation in Covariant Form: Solution, Green's Function...''' 5 pages

==EM(III) Nonclassical light==

*G. Vandergriff '''The diffraction and spreading of a wavepacket''' Am.J.Phys. 72(3), 2004
*K. Gibble '''Difference between a photon's momentum and an atom's recoil''' PRL 97, 2006
*F. Biancalana '''Dynamics of light propogation in spatiotemporal dielectric structures''' Phys.Rev.E 75, 2007
*J. Zalesny '''Propogation of photons in resting and moving media''' Phy.Rev.E 63, 2001
*A. Drezet '''The physical origin of the Fresnel drag of light by a moving dielectric medium''' Eur.Phys.J.B 45, 2005
*Д.Н. Клышко '''Неклассический свет''' Usp.Phys.Nauk 1996
*H.J. Kimble '''Photon Antibunching in resonance fluorescence''' Phys.Rev.Let. 39(11), 1997

==Other==
*Paul S. Wesson '''Fundamental Unsolved Problems in Astrophysics''' Space Science Reviews, August 2001, Volume 98, Issue 3-4, pp 329-342
*Hannes Alfven '''Cosmology: Myth or Science?''' J. Astrophys. Astr. (1984) 5, 79–98 
*''How to teach special relativity'' printout

*T. Fulton, F. Rohrlich, L. Witten '''Conformal Invariance in Physics''' Rev. Mod. Phys. 34, 442–457 (1962)
*Timothy H. Boyer '''Blackbody Radiation, Conformal Symmetry, and the Mismatch Between Classical Mechanics and Electromagnetism''' J. Phys. A: Math. Gen. 38 (2005)

*Giovanni Salesi '''Non-Newtonian Mechanics''' Int.J.Mod.Phys.A17:347-374,2002
*P. Lancon, G. Batrouni, L. Lobry, N. Ostrowsky '''Drift without flux: Brownian walker with a space dependent diffusion coefficient'''
*Н.А.КОЗЫРЕВ '''ОБ ИССЛЕДОВАНИЯХ ФИЗИЧЕСКИХ СВОЙСТВ ВРЕМЕНИ'''
*H J Hrgovcic '''Discrete representations of the n-dimensional wave equation''' 1992 J. Phys. A: Math. Gen. 25 1329
*Kwok Sau Fa '''Fokker-Planck equation with variable diffusion coefficient in the Stratonovich approach''' arXiv:cond-mat/0503331v2  [cond-mat.soft]  15 Mar 2005
*E. Comay '''Theoretical Errors in Contemporary Physics''' Apeiron, Vol. 13, No. 2, April 2006
*Jason Semitecolos '''Describing the Patterns of Nature: Information and the Structure of Physical Theories''' arXiv:quant-ph/0212080
*Thomas E. Phipps, Jr. '''Observations of the Marinov Motor''' APEIRON Vol. 5 Nr.3-4, July-October 1998

*chapter 14 '''Basic Radiobiology'''
*tutorial 1 '''Introduction to ion range doses and damage'''